Emboss Water Download
If you are compiling a fresh installation.
Emboss water download. Water reads a nucleotide or protein sequence and one or more sequence to be aligned to it. Emboss water uses the smith waterman algorithm modified for speed enhancments to calculate the local alignment of a sequence to one or more other sequences. Gnome emboss v 1 0 gnome emboss is an open source application to help scientists handle dna rna and protein sequences. Configure make if you compile it on subsequent occasions use the following rm config cache make clean configure make configuring.
Gunzip emboss 6 x x tar gz tar xvf emboss 6 x x tar. Emboss water uses the smith waterman algorithm modified for speed enhancments to calculate the local alignment of a sequence to one or more other sequences. Emboss explorer v 2 2 0 emboss explorer is a web based graphical user interface to the emboss suite of bioinformatics tools. It uses gnome gtk for the user interface and emboss libraries.
Major sequence database sources defined as standard in emboss installations include srs embl srs uniprot and ensembl. It is written in perl and is exceedingly simple to install configure maintain and. When you have downloaded your copy of emboss you will need to configure emboss. The input is a standard emboss sequence query also known as a usa.
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